Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCTAATGCGGGCAGCAGAGGAGCCAGTGT
((((((((((((((((.(((..&.)))...))).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354679
GeneSymbolPRKCD
Binding site567,599
Score0.827
Seed1
Au0.397
Energy-27.8
Binding len25
Me-3.938
Phylopstem3.916818117647059
Phylopflank4.297618737499999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure