Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAACTGCAGCCATGTGAT
(((((((((((((((((....&))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017980
GeneSymbolLIMS2
Binding site1048,1068
Score0.846
Seed1
Au0.426
Energy-21.8
Binding len20
Me-3.938
Phylopstem5.433384631578948
Phylopflank4.912905115000001
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure