Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCTTACCTCAGTCTTATGCAGCGACCGTAGCCAGACCAAGTGCAT
.((((((((((((((((((((&)))))....................))))))))))).........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017983
GeneSymbolWIPI1
Binding site1196,1246
Score0.846
Seed1
Au0.456
Energy-21.9
Binding len50
Me-3.793
Phylopstem4.194042328571429
Phylopflank4.460005187499999
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure