Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGACCAATGGCGTGCTGCC
..((((((((.((((...(((&))).....)))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017986
GeneSymbolSLC52A1
Binding site1543,1566
Score0.846
Seed1
Au0.426
Energy-19.4
Binding len23
Me-8.015
Phylopstem3.5426117777777777
Phylopflank2.215968826
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure