Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCTACAAAAGACCCCACAGCTGTAGA
(((((((((.(((((((((((&))))...)))))......)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017987
GeneSymbolRUFY2
Binding site518,549
Score1.0
Seed1
Au0.5
Energy-20.6
Binding len31
Me-5.18
Phylopstem0.07845335
Phylopflank0.34335235500000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure