Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCTTTCCTTCTAGCTCCGACGTTTGCGGCCGCGGGGGCGGC
((((..(((((((((((((((&.)).)))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017988
GeneSymbolSCYL2
Binding site49,93
Score0.923
Seed0
Au0.397
Energy-23.6
Binding len24
Me-9.958
Phylopstem0.2868911687499999
Phylopflank0.5134796275
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end8
Position5UTR
2D Structure