Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCATTGTGGTCAGA
..(((((.((((((((((....&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017998
GeneSymbolC9orf40
Binding site2214,2230
Score0.923
Seed0
Au0.603
Energy-17.7
Binding len16
Me-7.271
Phylopstem0.11369280000000001
Phylopflank-0.51171219375
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure