Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCGACTTCGCTGAGCAGCCGCC
..((.((((((((((((((((&))))))))))).......))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017998
GeneSymbolC9orf40
Binding site360,387
Score0.923
Seed0
Au0.279
Energy-21.6
Binding len27
Me-9.076
Phylopstem0.28743337086956516
Phylopflank0.42607376187500007
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure