Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCTGGACGCCGCACGCCTTGTCCGCTGCAAC
((((((((((((.(((..(((&.)))..))))))))..........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017999
GeneSymbolRNF31
Binding site343,381
Score0.846
Seed1
Au0.368
Energy-21.9
Binding len32
Me-5.227
Phylopstem1.2615320336363636
Phylopflank1.3433954372500003
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure