Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGGCCGCGCTGCT
..(((((.((((((....(((&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018006
GeneSymbolTRMU
Binding site102,119
Score0.846
Seed0
Au0.279
Energy-21.2
Binding len17
Me-8.239
Phylopstem3.6687666666666665
Phylopflank4.0570443975
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure