Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCCCAGCTGTT
..(((((((.(((((...(((&)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354689
GeneSymbolRAF1
Binding site2639,2656
Score0.885
Seed1
Au0.5
Energy-20.3
Binding len17
Me-6.433
Phylopstem4.271210628571429
Phylopflank4.45127183
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure