Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGTACAGTTGTAGCTGCGAG
(((((((((((((((((((((&)))).))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018013
GeneSymbolSOBP
Binding site4286,4309
Score0.885
Seed1
Au0.529
Energy-23.8
Binding len23
Me-3.938
Phylopstem4.172469334090909
Phylopflank4.288381596250002
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure