Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACAACCAAGGTAGTTTGTAT
.(((((((((((((((((((.&))))))))))...)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018015
GeneSymbolRADX
Binding site3128,3152
Score0.923
Seed1
Au0.647
Energy-20.1
Binding len24
Me-3.793
Phylopstem0.31692106086956523
Phylopflank0.34852814750000005
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure