Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTTACAGCTAAAAATGCAGTTCAGCAGT
((((((((((((((((((.((&)).))))))))......))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018017
GeneSymbolCCDC186
Binding site1076,1106
Score0.923
Seed1
Au0.559
Energy-19.4
Binding len30
Me-3.938
Phylopstem-0.0861882923076923
Phylopflank0.000153398750000016
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure