Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAACAACTTCAGCAAGCAC
.(((.((((.((((((..(((&)))..)))))).))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018017
GeneSymbolCCDC186
Binding site2332,2354
Score0.846
Seed0
Au0.588
Energy-18.2
Binding len22
Me-9.155
Phylopstem1.9114194999999998
Phylopflank0.7289491504750001
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure