Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATTGCAGCTGTG
..((((((((((((...(((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018018
GeneSymbolSLC38A4
Binding site1760,1776
Score1.0
Seed1
Au0.574
Energy-20.3
Binding len16
Me-5.925
Phylopstem0.3977224
Phylopflank0.9991405175000003
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure