Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGCCCCGAACAGCAGCAGCAGCAGCTGCAGA
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018019
GeneSymbolMED9
Binding site364,400
Score0.923
Seed1
Au0.382
Energy-25.2
Binding len18
Me-6.762
Phylopstem3.6866838999999993
Phylopflank4.0589365512499995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure