Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCCAGCCCCCCGCGGGACGCCTGCGTCTACAGCAGCTGCT
..(((((((((((((...(((&)))...)))))........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018024
GeneSymbolNTAQ1
Binding site111,155
Score0.846
Seed1
Au0.426
Energy-22.7
Binding len44
Me-5.19
Phylopstem1.623340981081081
Phylopflank2.267297607500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure