Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCTTCCCGATACAAAAGATGCAGATAGATGAAAGAGAAGAGTTCGGCCCGCGGCTGCC
..(((((((((((((......&.))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018025
GeneSymbolGPATCH1
Binding site2454,2517
Score0.923
Seed1
Au0.412
Energy-21.6
Binding len16
Me-5.19
Phylopstem0.1868629214285714
Phylopflank1.1259978814999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure