Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAATCGCATAACTCAGGAGGCTGGAGA
((.((((((((((((.((((.&))))))))))))...........)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018039
GeneSymbolKDM4D
Binding site1582,1613
Score0.923
Seed0
Au0.485
Energy-19.6
Binding len31
Me-5.728
Phylopstem2.5802076
Phylopflank3.18366135875
Longest consecutive pairings12
Position of longest consecutive pairings19
Pairings in 3prime end6
PositionCDS
2D Structure