Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTAGCCGGGG
.((((((.((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018040
GeneSymbolGPATCH2
Binding site3654,3665
Score0.846
Seed1
Au0.662
Energy-15.2
Binding len11
Me-9.221
Phylopstem-0.14650099999999996
Phylopflank-0.026582706249999984
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure