Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTCCAGCCTCCCAGCTGCC
..(((((((.(((((..((((&))))....)))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018044
GeneSymbolNSUN5
Binding site416,440
Score0.846
Seed1
Au0.412
Energy-22.6
Binding len24
Me-6.433
Phylopstem-0.46102544285714286
Phylopflank-0.22153981999999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure