Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAGGCTGCAGGAGTGCCCTGCAT
.((((((((((((((((((..&))))))).)))))).......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018046
GeneSymbolAGGF1
Binding site3938,3965
Score0.846
Seed1
Au0.632
Energy-21.6
Binding len27
Me-3.793
Phylopstem0.15071900384615383
Phylopflank-0.35610152999999994
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end6
Position3UTR
2D Structure