Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCAGCAGAAGCGGCTGTAT
.(((((((((..((((..(((&)))...))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018046
GeneSymbolAGGF1
Binding site948,970
Score0.877
Seed1
Au0.588
Energy-19.7
Binding len22
Me-9.965
Phylopstem4.710165696666667
Phylopflank3.6880405896250004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure