Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGCCCTGCCTGAGTTGTGTGCATCCAGGG
.(((((((((((((((((....&.))))....)))))))))...)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018049
GeneSymbolPLEKHJ1
Binding site971,1003
Score0.846
Seed1
Au0.338
Energy-19.3
Binding len26
Me-3.793
Phylopstem2.7127002749999996
Phylopflank2.2584052975000004
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure