Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTCACATATCTGCGCCTGCAGCTGCT
..((((((((((.(((.((((&.))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018052
GeneSymbolVAC14
Binding site2283,2312
Score1.0
Seed1
Au0.456
Energy-23.8
Binding len20
Me-6.246
Phylopstem4.2134713999999995
Phylopflank5.602124644000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure