Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGGCAGCCGCGGGCTAAGGAGTCGCGAGGTTCCCCCAGCTGCC
..((((((((((((((..(((&)))...))))))))..........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018052
GeneSymbolVAC14
Binding site208,255
Score0.846
Seed1
Au0.338
Energy-22.7
Binding len47
Me-4.957
Phylopstem-0.2467203789
Phylopflank-0.16730393231250001
Longest consecutive pairings8
Position of longest consecutive pairings33
Pairings in 3prime end6
Position5UTR
2D Structure