Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTATGTGAGAGGAAGAGAATGTGTGTGCCTGTGGGTC
(((((((((((((((((((((.&)))))))))...............))))))))...)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018053
GeneSymbolXKR8
Binding site2069,2109
Score0.846
Seed1
Au0.559
Energy-18.4
Binding len40
Me-3.938
Phylopstem-0.0574427846153846
Phylopflank0.44244598999999996
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end7
Position3UTR
2D Structure