Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCTGCCCAGCGGGATTCCACTGCAGCTGTGGCTGCC
..(((((((((((((((.((.&.))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018053
GeneSymbolXKR8
Binding site1019,1059
Score1.0
Seed1
Au0.338
Energy-25.2
Binding len21
Me-4.957
Phylopstem0.09362815333333337
Phylopflank1.10595313375
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure