Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTACAGCACTGCAAGATCCCCGAGCTGCC
..(((((((((((((((((((&)))).))))..))))))..........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018056
GeneSymbolTMEM39B
Binding site294,327
Score0.846
Seed1
Au0.441
Energy-19.8
Binding len33
Me-4.957
Phylopstem4.630580624999999
Phylopflank3.6330868362500004
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure