Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGCGTGAAAGATGACGTCCTTAGCCCAGCAGCTGCAAC
((((((((((((...(((((.&.)))))..)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018072
GeneSymbolHEATR1
Binding site114,155
Score1.0
Seed1
Au0.412
Energy-25.1
Binding len22
Me-6.819
Phylopstem-0.7138776076923077
Phylopflank-0.45001588624999994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure