Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTACAACTTGGCAGATTGCAT
.((((((((((((((((((((&)))))))))))..)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018072
GeneSymbolHEATR1
Binding site5931,5955
Score1.0
Seed1
Au0.588
Energy-21.1
Binding len24
Me-3.793
Phylopstem1.988116997826087
Phylopflank1.67760426625
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure