Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCCGCTGGATGTTGCAGG
((((((((.((((.(..((((&))))..).)))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018073
GeneSymbolTRIM68
Binding site1023,1046
Score0.846
Seed1
Au0.5
Energy-19.3
Binding len23
Me-6.084
Phylopstem-0.7781431111111111
Phylopflank0.007943062500000014
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure