Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGTGGTCTGGG
.((.(((.((((((((((....&))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018077
GeneSymbolRBM28
Binding site7385,7402
Score0.923
Seed0
Au0.412
Energy-18.8
Binding len17
Me-9.139
Phylopstem-0.404542
Phylopflank-0.271578275
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure