Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354723
GeneSymbolVHL
Binding site1813,1836
Score0.923
Seed1
Au0.382
Energy-26.9
Binding len23
Me-10.109
Phylopstem0.5903120000000001
Phylopflank1.87439615025
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure