Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCACTTTTGATGCTAGGTT
(((((((((.(((((((.....&))))...)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018078
GeneSymbolLARP1B
Binding site3538,3558
Score0.923
Seed1
Au0.618
Energy-16.1
Binding len20
Me-5.18
Phylopstem0.7583154111111111
Phylopflank0.42558263500000004
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure