Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTATCAACCGAGAACAGCTGA
...(((((((((((((((((.&.))))).))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018079
GeneSymbolSRBD1
Binding site2270,2294
Score0.923
Seed0
Au0.529
Energy-20.6
Binding len24
Me-6.515
Phylopstem5.233112136363636
Phylopflank4.3771652125
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure