Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCATGAAACAGTAGCTGCAGA
((((((((((.(((.......&.))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018084
GeneSymbolCCDC88A
Binding site4471,4493
Score0.923
Seed1
Au0.676
Energy-18.7
Binding len16
Me-7.731
Phylopstem6.178350999999999
Phylopflank4.731983523749999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure