Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCATTTGTGTGAACCAGGG
.((((((((((((((((.....&)))))).)))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018086
GeneSymbolFIGN
Binding site6882,6902
Score1.0
Seed1
Au0.574
Energy-18.4
Binding len20
Me-3.793
Phylopstem3.400922684210527
Phylopflank2.9303829375
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end3
Position3UTR
2D Structure