Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGCCAGGAGCTGGAGGAGCAGGCAGTGG
(((((((((((((((((.((((&)))).)))))).....))))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354735
GeneSymbolPFKM
Binding site2933,2964
Score0.923
Seed1
Au0.456
Energy-27.5
Binding len31
Me-3.938
Phylopstem0.27792298399999993
Phylopflank0.59263817125
Longest consecutive pairings6
Position of longest consecutive pairings20
Pairings in 3prime end7
Position3UTR
2D Structure