Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGTATTGTATTTGGTAGGTA
(((((.((((((((((((((((&))))))))))))))..)).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018087
GeneSymbolNDC1
Binding site4015,4040
Score0.923
Seed0
Au0.574
Energy-19.7
Binding len25
Me-5.839
Phylopstem4.105908055555556
Phylopflank2.6522544475
Longest consecutive pairings14
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure