Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCATTGTGTGTTGATAATCTACACACCATCTGTTGGAACCAGGG
.((((((((((((((.(((...&))))))))))))............................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018087
GeneSymbolNDC1
Binding site4058,4104
Score0.923
Seed1
Au0.544
Energy-18.4
Binding len46
Me-4.026
Phylopstem1.9909522333333338
Phylopflank3.0501211250000004
Longest consecutive pairings12
Position of longest consecutive pairings34
Pairings in 3prime end4
Position3UTR
2D Structure