Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTACAGGATCAACTTCCAGCCAGACCCAGCCAGGC
.((((((......(((((((((&))))))))).......................)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018090
GeneSymbolNECAP2
Binding site770,809
Score0.923
Seed1
Au0.441
Energy-17.3
Binding len39
Me-15.867
Phylopstem1.582657811111111
Phylopflank2.4570642537500005
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end8
PositionCDS
2D Structure