Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGTCCAGCCAGCAGTTGCT
..(((((((((((((..(((.&)))....))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018090
GeneSymbolNECAP2
Binding site673,695
Score0.949
Seed1
Au0.368
Energy-22.5
Binding len22
Me-5.19
Phylopstem0.3909363071428572
Phylopflank1.31217719125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure