Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCCATGACCAGTTCTGGCCAGGAGCTGGAGG
((.(((((.((((((((((((&))))))))))).................).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354735
GeneSymbolPFKM
Binding site2913,2952
Score0.897
Seed0
Au0.397
Energy-23.8
Binding len39
Me-6.552
Phylopstem0.5208173103448276
Phylopflank0.32322053125000005
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end8
Position3UTR
2D Structure