Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCCAGCTACCTGAACATTGTGGGCCTGGTT
(((.(((.((((((((......&.)))))))).))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001354742
GeneSymbolPFKM
Binding site528,561
Score0.846
Seed0
Au0.485
Energy-18.2
Binding len18
Me-9.283
Phylopstem5.9839616125
Phylopflank4.2558968225000005
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure