Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCATCTGGAGTGTCAGGTT
(((((((((.(((((((.....&))))).))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018100
GeneSymbolEFHC1
Binding site5720,5740
Score0.846
Seed1
Au0.456
Energy-17.0
Binding len20
Me-5.18
Phylopstem-0.0036367888888889028
Phylopflank-0.046236211250000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure