Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGCGGCGGTGGTACCGGCTGCAATGGTGTCC
.((((((((((((...(((((&.)))))....)))))))..)).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018100
GeneSymbolEFHC1
Binding site44,78
Score0.846
Seed1
Au0.382
Energy-25.9
Binding len26
Me-5.619
Phylopstem-0.5637455400000001
Phylopflank0.7234163749999998
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure