Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTAGGATAATGGCCTCCAGCTGCATCCATGTTGCTGCAGA
(((((((((((((((..((((&.)))).))))))))........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018100
GeneSymbolEFHC1
Binding site4474,4517
Score0.923
Seed1
Au0.574
Energy-23.7
Binding len30
Me-4.171
Phylopstem0.2711673913043479
Phylopflank0.14535416250000005
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure