Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTCCGCCTACGGCTGCAAG
((((((((((((..((.(((.&))))).))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018105
GeneSymbolTHAP1
Binding site241,264
Score0.923
Seed1
Au0.397
Energy-21.6
Binding len23
Me-6.084
Phylopstem0.5679503750000001
Phylopflank0.9080485225
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure